Influence of Urbanization on Epiphytic Bacterial Communities of the Platanus × hispanica Tree Leaves in a Biennial Study.
Identifieur interne : 000073 ( Main/Exploration ); précédent : 000072; suivant : 000074Influence of Urbanization on Epiphytic Bacterial Communities of the Platanus × hispanica Tree Leaves in a Biennial Study.
Auteurs : Jordan Espenshade [Belgique] ; Sofie Thijs [Belgique] ; Stanislaw Gawronski [Pologne] ; Hannelore Bové [Belgique] ; Nele Weyens [Belgique] ; Jaco Vangronsveld [Belgique, Pologne]Source :
- Frontiers in microbiology [ 1664-302X ] ; 2019.
Abstract
The aerial surfaces of plants harbor diverse communities of microorganisms. The rising awareness concerning the potential roles of these phyllosphere microbiota for airborne pollutant remediation and plant growth promotion, advocates for a better understanding of their community structure and dynamics in urban ecosystems. Here, we characterized the epiphytic microbial communities on leaves of Platanus × hispanica trees in the city centre of Hasselt (Belgium), and the nearby forest area of Bokrijk, Genk (Belgium). We compared the influences of season, site, and air pollutants concentration variations on the tree's phyllosphere microbiome by determining the intra- and inter-individual variation in leaf bacterial communities. High-throughput amplicon sequencing of the 16S rRNA gene revealed large variation in the bacterial community structure and diversity throughout the years but also allowed to discriminate an environment effect on community assembly. Partial drivers for this environment effect on composition can be correlated with the huge differences in ultrafine particulate matter (UFP) and black carbon on the leaves. A change in bacterial community composition was noted for trees growing in the city center compared to the natural site, and also more human-associated genera were found colonizing the leaves from the city center. These integrated results offer an original and first insight in the Platanus phyllomicrobiota, which can offer new opportunities to use phyllosphere microorganisms to enhance air pollution degradation.
DOI: 10.3389/fmicb.2019.00675
PubMed: 31024477
PubMed Central: PMC6460055
Affiliations:
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Urbanization on Epiphytic Bacterial Communities of the <i>Platanus × hispanica</i> Tree Leaves in a Biennial Study.</title><author><name sortKey="Espenshade, Jordan" sort="Espenshade, Jordan" uniqKey="Espenshade J" first="Jordan" last="Espenshade">Jordan Espenshade</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Environmental Sciences, Hasselt University, Diepenbeek, Belgium.</nlm:affiliation><country xml:lang="fr">Belgique</country><wicri:regionArea>Centre for Environmental Sciences, Hasselt University, Diepenbeek</wicri:regionArea><wicri:noRegion>Diepenbeek</wicri:noRegion></affiliation></author><author><name sortKey="Thijs, Sofie" sort="Thijs, Sofie" uniqKey="Thijs S" first="Sofie" last="Thijs">Sofie Thijs</name><affiliation wicri:level="1"><nlm:affiliation>Centre for Environmental Sciences, Hasselt University, Diepenbeek, Belgium.</nlm:affiliation><country xml:lang="fr">Belgique</country><wicri:regionArea>Centre for Environmental Sciences, Hasselt University, 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Poland.</nlm:affiliation><country xml:lang="fr">Pologne</country><wicri:regionArea>Department of Plant Physiology, Faculty of Biology and Biotechnology, Maria Curie-Skłodowska University, Lublin</wicri:regionArea><wicri:noRegion>Lublin</wicri:noRegion></affiliation></author></analytic><series><title level="j">Frontiers in microbiology</title><idno type="ISSN">1664-302X</idno><imprint><date when="2019" type="published">2019</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The aerial surfaces of plants harbor diverse communities of microorganisms. The rising awareness concerning the potential roles of these phyllosphere microbiota for airborne pollutant remediation and plant growth promotion, advocates for a better understanding of their community structure and dynamics in urban ecosystems. Here, we characterized the epiphytic microbial communities on leaves of <i>Platanus × hispanica</i> trees in the city centre of Hasselt (Belgium), and the nearby forest area of Bokrijk, Genk (Belgium). We compared the influences of season, site, and air pollutants concentration variations on the tree's phyllosphere microbiome by determining the intra- and inter-individual variation in leaf bacterial communities. High-throughput amplicon sequencing of the 16S rRNA gene revealed large variation in the bacterial community structure and diversity throughout the years but also allowed to discriminate an environment effect on community assembly. Partial drivers for this environment effect on composition can be correlated with the huge differences in ultrafine particulate matter (UFP) and black carbon on the leaves. A change in bacterial community composition was noted for trees growing in the city center compared to the natural site, and also more human-associated genera were found colonizing the leaves from the city center. These integrated results offer an original and first insight in the <i>Platanus</i> phyllomicrobiota, which can offer new opportunities to use phyllosphere microorganisms to enhance air pollution degradation.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">31024477</PMID><DateRevised><Year>2020</Year><Month>10</Month><Day>01</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">1664-302X</ISSN><JournalIssue CitedMedium="Print"><Volume>10</Volume><PubDate><Year>2019</Year></PubDate></JournalIssue><Title>Frontiers in microbiology</Title><ISOAbbreviation>Front Microbiol</ISOAbbreviation></Journal><ArticleTitle>Influence of Urbanization on Epiphytic Bacterial Communities of the <i>Platanus × hispanica</i> Tree Leaves in a Biennial Study.</ArticleTitle><Pagination><MedlinePgn>675</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.3389/fmicb.2019.00675</ELocationID><Abstract><AbstractText>The aerial surfaces of plants harbor diverse communities of microorganisms. The rising awareness concerning the potential roles of these phyllosphere microbiota for airborne pollutant remediation and plant growth promotion, advocates for a better understanding of their community structure and dynamics in urban ecosystems. Here, we characterized the epiphytic microbial communities on leaves of <i>Platanus × hispanica</i> trees in the city centre of Hasselt (Belgium), and the nearby forest area of Bokrijk, Genk (Belgium). We compared the influences of season, site, and air pollutants concentration variations on the tree's phyllosphere microbiome by determining the intra- and inter-individual variation in leaf bacterial communities. High-throughput amplicon sequencing of the 16S rRNA gene revealed large variation in the bacterial community structure and diversity throughout the years but also allowed to discriminate an environment effect on community assembly. Partial drivers for this environment effect on composition can be correlated with the huge differences in ultrafine particulate matter (UFP) and black carbon on the leaves. A change in bacterial community composition was noted for trees growing in the city center compared to the natural site, and also more human-associated genera were found colonizing the leaves from the city center. These integrated results offer an original and first insight in the <i>Platanus</i> phyllomicrobiota, which can offer new opportunities to use phyllosphere microorganisms to enhance air pollution degradation.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Espenshade</LastName><ForeName>Jordan</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Centre for Environmental Sciences, Hasselt University, Diepenbeek, Belgium.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Thijs</LastName><ForeName>Sofie</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Centre for Environmental Sciences, Hasselt University, Diepenbeek, Belgium.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Gawronski</LastName><ForeName>Stanislaw</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Faculty of Horticulture, Biotechnology and Landscape Architecture, Warsaw University of Life Sciences, Warsaw, Poland.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Bové</LastName><ForeName>Hannelore</ForeName><Initials>H</Initials><AffiliationInfo><Affiliation>Centre for Environmental Sciences, Hasselt University, Diepenbeek, Belgium.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Biomedical Research Institute, Hasselt University, Diepenbeek, Belgium.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Centre for Surface Chemistry and Catalysis, KU Leuven, Leuven, Belgium.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Weyens</LastName><ForeName>Nele</ForeName><Initials>N</Initials><AffiliationInfo><Affiliation>Centre for Environmental Sciences, Hasselt University, Diepenbeek, Belgium.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Vangronsveld</LastName><ForeName>Jaco</ForeName><Initials>J</Initials><AffiliationInfo><Affiliation>Centre for Environmental Sciences, Hasselt University, Diepenbeek, Belgium.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Plant Physiology, Faculty of Biology and Biotechnology, Maria Curie-Skłodowska University, Lublin, Poland.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2019</Year><Month>04</Month><Day>04</Day></ArticleDate></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Front Microbiol</MedlineTA><NlmUniqueID>101548977</NlmUniqueID><ISSNLinking>1664-302X</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">biodiversity</Keyword><Keyword MajorTopicYN="N">black carbon</Keyword><Keyword MajorTopicYN="N">particulate matter</Keyword><Keyword MajorTopicYN="N">phylloremediation</Keyword><Keyword MajorTopicYN="N">phyllosphere-inhabiting bacteria</Keyword><Keyword MajorTopicYN="N">plant-microbe interactions</Keyword><Keyword MajorTopicYN="N">urban microbiome</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2018</Year><Month>11</Month><Day>29</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2019</Year><Month>03</Month><Day>18</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2019</Year><Month>4</Month><Day>27</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2019</Year><Month>4</Month><Day>27</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2019</Year><Month>4</Month><Day>27</Day><Hour>6</Hour><Minute>1</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">31024477</ArticleId><ArticleId IdType="doi">10.3389/fmicb.2019.00675</ArticleId><ArticleId IdType="pmc">PMC6460055</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Microb Ecol. 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sortKey="Bove, Hannelore" sort="Bove, Hannelore" uniqKey="Bove H" first="Hannelore" last="Bové">Hannelore Bové</name><name sortKey="Bove, Hannelore" sort="Bove, Hannelore" uniqKey="Bove H" first="Hannelore" last="Bové">Hannelore Bové</name><name sortKey="Thijs, Sofie" sort="Thijs, Sofie" uniqKey="Thijs S" first="Sofie" last="Thijs">Sofie Thijs</name><name sortKey="Vangronsveld, Jaco" sort="Vangronsveld, Jaco" uniqKey="Vangronsveld J" first="Jaco" last="Vangronsveld">Jaco Vangronsveld</name><name sortKey="Weyens, Nele" sort="Weyens, Nele" uniqKey="Weyens N" first="Nele" last="Weyens">Nele Weyens</name></country><country name="Pologne"><noRegion><name sortKey="Gawronski, Stanislaw" sort="Gawronski, Stanislaw" uniqKey="Gawronski S" first="Stanislaw" last="Gawronski">Stanislaw Gawronski</name></noRegion><name sortKey="Vangronsveld, Jaco" sort="Vangronsveld, Jaco" uniqKey="Vangronsveld J" first="Jaco" last="Vangronsveld">Jaco Vangronsveld</name></country></tree></affiliations></record>Pour 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